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Snyk for Python

Snyk provides security scanning on Projects for vulnerabilities both through the Snyk CLI and from the Snyk Web UI through different Snyk Integrations.
This page describes how to use Snyk to scan Python Projects.

Features of Snyk for Python

Package managers / Features
CLI support
Git support
License scanning
Fix PRs
Pip
✔︎
✔︎
✔︎
✔︎
Poetry
✔︎
✔︎
✔︎
Pipenv
✔︎
✔︎ (Open beta)
✔︎
setup.py
✔︎
✔︎
Feature availability Features may not be available, depending on your plan. See the Plans and pricing page for more details.

How Snyk for Python works

Snyk builds a dependency tree, and then uses the vulnerability database to find vulnerabilities in any of the dependencies in the tree.
How Snyk analyzes and builds the tree varies depending on the language and package manager for the Project and the location of your Project.

Snyk CLI for Python Projects

When you use the CLI, how Snyk analyzes and builds the tree varies depending on the language and package manager for the Project.
To scan your Projects, you must first install the relevant package manager and ensure that your Project contains the supported manifest files.

Snyk CLI options for Python

For information about the snyk test options available for use with Python, see Options for Python Projects in the test command help.
For the available snyk monitor options, see Options for Python Projects in the monitor command help.

Pip and Snyk CLI

Run pip install before scanning with the CLI,for example:
pip install -r requirements.txt
Pip requirements.txt files specify only top-level dependencies, not nested or transitive ones. Therefore, the full Pip Project must be installed to ensure the CLI can build a complete dependency tree.

Poetry and Snyk CLI

To build the dependency tree for a Poetry application, Snyk uses pyproject.toml and poetry.lock files. Both files must be present for Snyk to scan Poetry dependencies and identify issues.
If no poetry.lock file is present; you should run poetry lock to generate one before scanning.
PEP 621 is a standard for defining direct dependencies in pyproject.toml files, which is different from how Poetry does this.
Snyk does not currently support PEP 621.

Pipenv and Snyk CLI

To build the dependency tree for a Pipenv application, Snyk uses Pipfile and Pipfile.lock files. Both files must be present for Snyk to scan Poetry dependencies and identify issues.
Run pip install before scanning with the CLI
Run pipenv install to ensure the CLI can build an up-to-date, accurate dependency tree using pipenv graph.

setup.py and Snyk CLI

To build the dependency tree, Snyk analyzes the setup.py file, and detects packages listed in the install_requires key.
This file will not be discovered automatically by the CLI. It must be specified manually using the --file option, for example:
snyk test --file=setup.py
You can also convert setup.py to requirements.txt by installing the packages into a virtual environment and then running pip freeze.

Git services for Python Projects

To scan your Projects, you must ensure your repository contains the supported manifest files.

Pip and Git repositories

URLs in requirements.txt files are not supported, as this poses a security risk. They are removed before resolving the dependencies in the files.
To scan Pip Projects, Snyk analyzes your requirements.txt files using native pip tooling in an isolated Linux environment.
Snyk imports any file that follows the **/*req*.txt pattern. This can help if you have renamed the requirements.txt files, for example, to requirements-dev.txt.
Snyk also looks for files using the **/requirements/*.txt pattern. This can help if you have placed your files in a requirements folder, for example, requirements/requirements.txt.
If you are using a package manager that creates different manifest file formats from requirements.txt, then you may be able to convert or export the manifest file to the requirements.txt format.
An example follows of how dephell is used to convert from Conda environments.yml to a requirements.txt.
dephell deps convert --from=conda --to=requirements.txt

Poetry and Git repositories

To scan Poetry Projects, Snyk inspects your pyproject.toml and poetry.lock files.
You can choose whether Snyk should include dev dependencies when scanning your Poetry Projects.
Snyk regards non-dev dependencies to be those declared in tool.poetry.dependencies, the implicit main group. All others are classed as dev dependencies.
Poetry dev dependencies are not included in scans by default. To change this, modify your settings as follows:
  1. 1.
    Log in to your Snyk account and navigate to the relevant Group and Organization.
  2. 2.
    Select Settings, then Languages.
  3. 3.
    Select Edit settings for Python.
  4. 4.
    Enable or disable the Scan Poetry dev dependencies option under the Poetry dev dependencies settings.
Poetry dev dependency settings
Poetry dev dependency settings

Pipenv and Git repositories

Pipenv is available as an open beta feature, meaning that some of its functionalities might be subject to change.
Private PyPI mirrors are not supported. Pipfiles specifying a private mirror as their only source will not be imported.
To scan Pipenv Projects, Snyk analyzes your Pipfile and Pipfile.lock files using native pipenv tooling in an isolated Linux environment.
When you scan in the isolated environment, private packages and those with non-Linux OS requirements may be unresolvable and omitted from the dependency tree.
If a Pipfile.lock is present, any unresolved packages it contains are added to the top level of the dependency tree using versions from the lock file.
You can choose whether Snyk should include dependencies specified in [dev-packages] when scanning your Pipenv Projects.
Pipenv dev dependencies are not included in scans by default. To change this, modify your settings as follows:
  1. 1.
    Log in to your Snyk account and navigate to the relevant Group and Organization.
  2. 2.
    Select Settings, then Languages.
  3. 3.
    Select Edit settings for Python.
  4. 4.
    Enable or disable the Scan Pipenv dev dependencies option under the Pipenv settings.
Pipenv dev dependency settings
Pipenv dev dependency settings

Python version support

Some Python Projects may have dependencies that are valid with certain versions of Python only.
Therefore, the version of Python used when scanning can affect the dependency tree Snyk generates.
You can specify the version of Python that Snyk uses to scan dependencies in both the CLI and Git integration.

Setting the Python version in the CLI

Add the following option to snyk test or snyk monitor with the value of the Python binary:
--command=python3
For details, see the Test command help and the Monitor command help.

Setting the Python version in Git Projects

Pip and Python versions

When you are scanning Pip Projects imported from Git, Snyk uses Python 2 or 3.
Currently supported versions are 2.7.16 and 3.7.4.
By default, Snyk tests Pip Projects using Python 3.
To define which Python Major version Snyk uses to test your Git-imported Pip Projects, use either Organization settings or a .snyk policy file.
To define the Python version for all Projects in an Organization:
  1. 1.
    Log in to your Snyk account and navigate to the relevant Group and Organization.
  2. 2.
    Select Settings, then Languages.
  3. 3.
    Select Edit settings for Python.
  4. 4.
    From the Python version dropdown, select the Python 2 or Python 3 version to use when testing Projects for this Organization.
Pip Python version settings
Pip Python version settings
Snyk recommends you create different Organizations to work with different Python versions.
If you prefer one Organization but require Projects to use different Python versions, you may add a .snyk file to a Project repository and specify the desired version.
The .snyk file must be in the same directory as the Project manifest file.
Snyk detects the Major version specified and uses this to decide whether to test with Python 2 or Python 3, for example:
language-settings:
python: '3.7.2'
In this example, Snyk runs the scan using its currently supported version of Python 3. Snyk does not use the exact minor and patch version specified.

Pipenv and Python versions

Pipenv is available as an open feature, meaning that some of its functionalities might be subject to change.
Currently supported Python versions are 3.8, 3.9, 3.10, 3.11.
Snyk uses Python version information specified in each Pipfile to choose the major and minor versions to use in scanning, for example:
[requires]
python_version = "3.6"
Specific Patch versions are ignored; Snyk uses a recent Patch version from each series.
Snyk defaults to Python 3.10 if the Pipfile contains:
  • No Python version information
  • Only a Major version
  • An unsupported version

Poetry and Python versions

There is no need to inform Snyk about Python versions for Poetry Projects.
Poetry files contain sufficient information to build a full dependency tree without running native tooling.

Scanning Python Projects in IDEs

If you are using any of the supported IDEs to write Python, there are some configurations you must add to scan Python manifest files properly.
If you are using a virtual environment, you must add the PYTHON_PATH to the Additional Options text input in the Snyk integration settings, for example, --command=.venv/bin/python. Snyk tries to look for a *req*.txt file in the root of the Project as it is seen in the IDE.
However, if you have manifest files in other directories within the root of the Project, Snyk cannot identify them. For Snyk to find them, you must use the --all-projects option. Snyk then recursively searches each Project directory to find all the manifest files.
If those directories each require a different virtual environment to run, the Snyk scan will not be successful because it will use one virtual environment to search for installed dependencies. In this case, it is best to use the CLI or the Git integration to get vulnerability information on all the dependencies listed in each Project directory.